Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Slc6a4Q60857 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.17■□□□□ 0.34
Slc6a4Q60857 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Slc6a4Q60857 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Olfr129-201ENSMUST00000122318 993 ntBASIC17.16■□□□□ 0.34
Slc6a4Q60857 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.16■□□□□ 0.34
Slc6a4Q60857 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Slc6a4Q60857 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.15■□□□□ 0.34
Slc6a4Q60857 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Gm15794-201ENSMUST00000120182 631 ntBASIC17.15■□□□□ 0.34
Slc6a4Q60857 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Gm17807-201ENSMUST00000186869 298 ntBASIC17.15■□□□□ 0.34
Slc6a4Q60857 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Slc6a4Q60857 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.14■□□□□ 0.34
Slc6a4Q60857 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a4Q60857 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
Slc6a4Q60857 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Gm29707-201ENSMUST00000196325 491 ntBASIC17.14■□□□□ 0.33
Slc6a4Q60857 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Slc6a4Q60857 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Slc6a4Q60857 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Gm28033-201ENSMUST00000184224 96 ntBASIC17.12■□□□□ 0.33
Slc6a4Q60857 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Slc6a4Q60857 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms