Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shroom1Q5SX79 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Shroom1Q5SX79 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Gm27742-201ENSMUST00000184667 60 ntBASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Shroom1Q5SX79 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Mir3081-201ENSMUST00000175305 84 ntBASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Shroom1Q5SX79 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Shroom1Q5SX79 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Shroom1Q5SX79 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Shroom1Q5SX79 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms