Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ctc1Q5SUQ9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.73■□□□□ 0.43
Ctc1Q5SUQ9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Ctc1Q5SUQ9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Gm13474-201ENSMUST00000122466 815 ntBASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Ctc1Q5SUQ9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Gm27000-201ENSMUST00000182943 842 ntBASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Ctc1Q5SUQ9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ctc1Q5SUQ9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms