Protein–RNA interactions for Protein: Q5RJF7

Cacna2d4, Voltage-dependent calcium channel subunit alpha-2/delta-4, mousemouse

Predictions only

Length 1,116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna2d4Q5RJF7 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Mir5130-201ENSMUST00000175160 84 ntBASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cacna2d4Q5RJF7 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Gm13474-201ENSMUST00000122466 815 ntBASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Gm9987-201ENSMUST00000069768 567 ntBASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cacna2d4Q5RJF7 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Gm7370-201ENSMUST00000219471 767 ntBASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cacna2d4Q5RJF7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Cacna2d4Q5RJF7 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Gm45058-201ENSMUST00000205810 766 ntBASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cacna2d4Q5RJF7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Spsb2-203ENSMUST00000112473 1322 ntBASIC18.65■□□□□ 0.58
Cacna2d4Q5RJF7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms