Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav2Q5R1I9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav2Q5R1I9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Gm7284-201ENSMUST00000131667 944 ntBASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Gm37722-201ENSMUST00000193757 208 ntBASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.38□□□□□ -0.27
Trav2Q5R1I9 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Gm29518-201ENSMUST00000190858 372 ntBASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Gm17808-201ENSMUST00000200859 894 ntBASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC13.37□□□□□ -0.27
Trav2Q5R1I9 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Gm11950-201ENSMUST00000121615 838 ntBASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Gm6623-201ENSMUST00000173570 544 ntBASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav2Q5R1I9 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms