Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-4Q5R1I0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Gm29518-201ENSMUST00000190858 372 ntBASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-4Q5R1I0 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Gm6623-201ENSMUST00000173570 544 ntBASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6d-4Q5R1I0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.08□□□□□ -0.15
Trav6d-4Q5R1I0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-4Q5R1I0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-4Q5R1I0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-4Q5R1I0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trav6d-4Q5R1I0 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Mir770-201ENSMUST00000103252 94 ntBASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Gm17808-201ENSMUST00000200859 894 ntBASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Gm18115-201ENSMUST00000221209 621 ntBASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trav6d-4Q5R1I0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.07□□□□□ -0.16
Trav6d-4Q5R1I0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms