Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.64□□□□□ -0.39
Trav3-3Q5R1C3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav3-3Q5R1C3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Prob1-201ENSMUST00000097619 3021 ntBASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav3-3Q5R1C3 Gm44616-201ENSMUST00000206417 1732 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms