Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Gm12260-201ENSMUST00000122447 411 ntBASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav8d-2Q5R1B6 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Gm13418-201ENSMUST00000119097 944 ntBASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Gm15173-201ENSMUST00000122049 433 ntBASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav8d-2Q5R1B6 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav8d-2Q5R1B6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav8d-2Q5R1B6 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC16.29■□□□□ 0.2
Trav8d-2Q5R1B6 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms