Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Bdp1Q571C7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Bdp1Q571C7 Gm14127-201ENSMUST00000117906 678 ntBASIC17.02■□□□□ 0.31
Bdp1Q571C7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.02■□□□□ 0.31
Bdp1Q571C7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Bdp1Q571C7 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Bdp1Q571C7 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
Bdp1Q571C7 Gm37500-201ENSMUST00000192059 1443 ntBASIC17■□□□□ 0.31
Bdp1Q571C7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17■□□□□ 0.31
Bdp1Q571C7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Bdp1Q571C7 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17■□□□□ 0.31
Bdp1Q571C7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17■□□□□ 0.31
Bdp1Q571C7 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Bdp1Q571C7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17■□□□□ 0.31
Bdp1Q571C7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17■□□□□ 0.31
Bdp1Q571C7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Bdp1Q571C7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Bdp1Q571C7 Gm13823-201ENSMUST00000119930 345 ntBASIC16.99■□□□□ 0.31
Bdp1Q571C7 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Bdp1Q571C7 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.99■□□□□ 0.31
Bdp1Q571C7 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Bdp1Q571C7 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.98■□□□□ 0.31
Bdp1Q571C7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Bdp1Q571C7 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Bdp1Q571C7 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms