Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
R3hdm4Q4VBF2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
R3hdm4Q4VBF2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
R3hdm4Q4VBF2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3hdm4Q4VBF2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
R3hdm4Q4VBF2 Gm11336-201ENSMUST00000118168 334 ntBASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Gm23634-201ENSMUST00000175071 91 ntBASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Gm37722-201ENSMUST00000193757 208 ntBASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Gm44450-201ENSMUST00000199528 114 ntBASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
R3hdm4Q4VBF2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Gm7977-201ENSMUST00000193787 748 ntBASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Gm18115-201ENSMUST00000221209 621 ntBASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3hdm4Q4VBF2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3hdm4Q4VBF2 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3hdm4Q4VBF2 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Gm11355-201ENSMUST00000121120 306 ntBASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.04■□□□□ 0.48
R3hdm4Q4VBF2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms