Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pds5bQ4VA53 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Pds5bQ4VA53 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Gm17968-201ENSMUST00000194902 784 ntBASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Pds5bQ4VA53 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC29.14■■■□□ 2.25
Pds5bQ4VA53 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Gm44492-201ENSMUST00000197012 141 ntBASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pds5bQ4VA53 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Fcho2-208ENSMUST00000224992 2964 ntBASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pds5bQ4VA53 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Gm2308-201ENSMUST00000166539 1004 ntBASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pds5bQ4VA53 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pds5bQ4VA53 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pds5bQ4VA53 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pds5bQ4VA53 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC29.09■■■□□ 2.25
Pds5bQ4VA53 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC29.09■■■□□ 2.25
Pds5bQ4VA53 AC131187.1-201ENSMUST00000224567 809 ntBASIC29.09■■■□□ 2.25
Pds5bQ4VA53 Hist1h2al-201ENSMUST00000091708 339 ntBASIC29.09■■■□□ 2.25
Pds5bQ4VA53 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pds5bQ4VA53 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC29.09■■■□□ 2.25
Pds5bQ4VA53 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
Pds5bQ4VA53 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC29.08■■■□□ 2.25
Pds5bQ4VA53 AC155252.2-201ENSMUST00000226946 680 ntBASIC29.08■■■□□ 2.25
Pds5bQ4VA53 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pds5bQ4VA53 Gm35558-201ENSMUST00000222675 2219 ntBASIC29.08■■■□□ 2.25
Pds5bQ4VA53 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Pds5bQ4VA53 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Gm8825-201ENSMUST00000182565 998 ntBASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Pds5bQ4VA53 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Pds5bQ4VA53 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Gm37153-201ENSMUST00000193637 231 ntBASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Gm44335-201ENSMUST00000196879 141 ntBASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Gm44297-201ENSMUST00000198304 141 ntBASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Gm44346-201ENSMUST00000198851 141 ntBASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Pds5bQ4VA53 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Pds5bQ4VA53 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pds5bQ4VA53 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
Pds5bQ4VA53 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pds5bQ4VA53 Gm4899-201ENSMUST00000178708 719 ntBASIC29.05■■■□□ 2.24
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms