Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.36■□□□□ 0.37
Trim80Q3V061 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.36■□□□□ 0.37
Trim80Q3V061 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.36■□□□□ 0.37
Trim80Q3V061 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Trim80Q3V061 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim80Q3V061 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim80Q3V061 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Trim80Q3V061 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Trim80Q3V061 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Trim80Q3V061 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim80Q3V061 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Trim80Q3V061 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.35■□□□□ 0.37
Trim80Q3V061 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim80Q3V061 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim80Q3V061 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim80Q3V061 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim80Q3V061 Gm15378-201ENSMUST00000121894 207 ntBASIC17.34■□□□□ 0.37
Trim80Q3V061 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Trim80Q3V061 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.34■□□□□ 0.37
Trim80Q3V061 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim80Q3V061 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim80Q3V061 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.33■□□□□ 0.37
Trim80Q3V061 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trim80Q3V061 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim80Q3V061 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.33■□□□□ 0.36
Trim80Q3V061 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim80Q3V061 Gm11249-201ENSMUST00000117071 859 ntBASIC17.33■□□□□ 0.36
Trim80Q3V061 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim80Q3V061 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim80Q3V061 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim80Q3V061 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Trim80Q3V061 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Trim80Q3V061 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim80Q3V061 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim80Q3V061 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Trim80Q3V061 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim80Q3V061 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim80Q3V061 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.32■□□□□ 0.36
Trim80Q3V061 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim80Q3V061 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Trim80Q3V061 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms