Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Fam196aQ3USH1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.79■□□□□ 0.28
Fam196aQ3USH1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Fam196aQ3USH1 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.78■□□□□ 0.28
Fam196aQ3USH1 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Fam196aQ3USH1 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Mir3113-201ENSMUST00000175478 76 ntBASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Gm44872-201ENSMUST00000207864 420 ntBASIC16.77■□□□□ 0.28
Fam196aQ3USH1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Chchd1-203ENSMUST00000224633 557 ntBASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Fam196aQ3USH1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam196aQ3USH1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam196aQ3USH1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam196aQ3USH1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam196aQ3USH1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam196aQ3USH1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Fam196aQ3USH1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Fam196aQ3USH1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Gm14701-201ENSMUST00000117156 348 ntBASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Fam196aQ3USH1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms