Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 AC107711.5-202ENSMUST00000226429 702 ntBASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Arhgef40Q3UPH7 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Gm7230-201ENSMUST00000173026 815 ntBASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 AC127349.1-201ENSMUST00000224590 266 ntBASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Arhgef40Q3UPH7 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Arhgef40Q3UPH7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Gm4995-201ENSMUST00000117247 432 ntBASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Arhgef40Q3UPH7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
Arhgef40Q3UPH7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Arhgef40Q3UPH7 Gm18856-201ENSMUST00000178096 1374 ntBASIC24.58■■□□□ 1.52
Arhgef40Q3UPH7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Arhgef40Q3UPH7 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC24.58■■□□□ 1.52
Arhgef40Q3UPH7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Gm4535-201ENSMUST00000182274 558 ntBASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Gm10355-201ENSMUST00000097146 517 ntBASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Arhgef40Q3UPH7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Gm5264-201ENSMUST00000190584 848 ntBASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Arhgef40Q3UPH7 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Gm43575-201ENSMUST00000196420 516 ntBASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 AC159093.1-201ENSMUST00000227779 380 ntBASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Arhgef40Q3UPH7 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
Arhgef40Q3UPH7 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC24.54■■□□□ 1.52
Arhgef40Q3UPH7 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
Arhgef40Q3UPH7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC24.54■■□□□ 1.52
Arhgef40Q3UPH7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms