Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rapgef1Q3UHC1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rapgef1Q3UHC1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rapgef1Q3UHC1 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rapgef1Q3UHC1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rapgef1Q3UHC1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rapgef1Q3UHC1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rapgef1Q3UHC1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.33■□□□□ 0.52
Rapgef1Q3UHC1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Gm37025-201ENSMUST00000195159 829 ntBASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rapgef1Q3UHC1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rapgef1Q3UHC1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Gm17661-201ENSMUST00000170317 270 ntBASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Gm7889-201ENSMUST00000185591 958 ntBASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rapgef1Q3UHC1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rapgef1Q3UHC1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rapgef1Q3UHC1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms