Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssbp4Q3U4B1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssbp4Q3U4B1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Ssbp4Q3U4B1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Ssbp4Q3U4B1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Ssbp4Q3U4B1 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Gm18669-201ENSMUST00000216049 778 ntBASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Ssbp4Q3U4B1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Ssbp4Q3U4B1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Ssbp4Q3U4B1 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Mir3081-201ENSMUST00000175305 84 ntBASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.08□□□□□ -0.16
Ssbp4Q3U4B1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ssbp4Q3U4B1 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Gm27741-201ENSMUST00000185060 237 ntBASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ssbp4Q3U4B1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms