Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shcbp1lQ3TTP0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shcbp1lQ3TTP0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shcbp1lQ3TTP0 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.92■□□□□ 0.3
Shcbp1lQ3TTP0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Shcbp1lQ3TTP0 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Shcbp1lQ3TTP0 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Shcbp1lQ3TTP0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Shcbp1lQ3TTP0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Gm27000-201ENSMUST00000182943 842 ntBASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Shcbp1lQ3TTP0 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Gm7284-201ENSMUST00000131667 944 ntBASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Gm29518-201ENSMUST00000190858 372 ntBASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Shcbp1lQ3TTP0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms