Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd8Q09XV5 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Gm25745-201ENSMUST00000174945 133 ntBASIC14.98□□□□□ -0.01
Chd8Q09XV5 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.98□□□□□ -0.01
Chd8Q09XV5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Gm14928-201ENSMUST00000120198 477 ntBASIC14.98□□□□□ -0.01
Chd8Q09XV5 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.98□□□□□ -0.01
Chd8Q09XV5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd8Q09XV5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.97□□□□□ -0.01
Chd8Q09XV5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Gm18889-201ENSMUST00000174284 929 ntBASIC14.97□□□□□ -0.01
Chd8Q09XV5 Gm45612-201ENSMUST00000211320 160 ntBASIC14.97□□□□□ -0.01
Chd8Q09XV5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd8Q09XV5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Gm18827-201ENSMUST00000188341 790 ntBASIC14.96□□□□□ -0.01
Chd8Q09XV5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.96□□□□□ -0.01
Chd8Q09XV5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd8Q09XV5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd8Q09XV5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd8Q09XV5 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd8Q09XV5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Chd8Q09XV5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.95□□□□□ -0.02
Chd8Q09XV5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd8Q09XV5 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd8Q09XV5 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd8Q09XV5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd8Q09XV5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.94□□□□□ -0.02
Chd8Q09XV5 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.94□□□□□ -0.02
Chd8Q09XV5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.94□□□□□ -0.02
Chd8Q09XV5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms