Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.99□□□□□ -0.33
Cdx4Q07424 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Gm13401-201ENSMUST00000117074 291 ntBASIC12.99□□□□□ -0.33
Cdx4Q07424 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.99□□□□□ -0.33
Cdx4Q07424 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.99□□□□□ -0.33
Cdx4Q07424 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Gm4974-201ENSMUST00000209974 875 ntBASIC12.99□□□□□ -0.33
Cdx4Q07424 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdx4Q07424 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.99□□□□□ -0.33
Cdx4Q07424 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cdx4Q07424 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.99□□□□□ -0.33
Cdx4Q07424 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cdx4Q07424 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Cdx4Q07424 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdx4Q07424 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC12.98□□□□□ -0.33
Cdx4Q07424 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC12.98□□□□□ -0.33
Cdx4Q07424 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.98□□□□□ -0.33
Cdx4Q07424 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Gm3375-201ENSMUST00000203929 796 ntBASIC12.98□□□□□ -0.33
Cdx4Q07424 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.98□□□□□ -0.33
Cdx4Q07424 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.98□□□□□ -0.33
Cdx4Q07424 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Gm43272-201ENSMUST00000200599 1584 ntBASIC12.98□□□□□ -0.33
Cdx4Q07424 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cdx4Q07424 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC12.97□□□□□ -0.33
Cdx4Q07424 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Gm27463-201ENSMUST00000183569 57 ntBASIC12.97□□□□□ -0.33
Cdx4Q07424 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cdx4Q07424 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cdx4Q07424 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cdx4Q07424 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdx4Q07424 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cdx4Q07424 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cdx4Q07424 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.96□□□□□ -0.33
Cdx4Q07424 Gm10517-202ENSMUST00000192970 758 ntBASIC12.96□□□□□ -0.33
Cdx4Q07424 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cdx4Q07424 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Gm37519-201ENSMUST00000191687 2210 ntBASIC12.96□□□□□ -0.34
Cdx4Q07424 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cdx4Q07424 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms