Protein–RNA interactions for Protein: Q01149

Col1a2, Collagen alpha-2(I) chain, mousemouse

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a2Q01149 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Col1a2Q01149 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Gm43347-201ENSMUST00000200226 580 ntBASIC20.96■□□□□ 0.95
Col1a2Q01149 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.96■□□□□ 0.95
Col1a2Q01149 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.96■□□□□ 0.95
Col1a2Q01149 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC20.96■□□□□ 0.95
Col1a2Q01149 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Col1a2Q01149 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Col1a2Q01149 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Col1a2Q01149 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Col1a2Q01149 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.94■□□□□ 0.94
Col1a2Q01149 AC164629.2-201ENSMUST00000217916 270 ntBASIC20.94■□□□□ 0.94
Col1a2Q01149 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col1a2Q01149 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col1a2Q01149 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Col1a2Q01149 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Col1a2Q01149 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Col1a2Q01149 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Col1a2Q01149 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 Gm7935-201ENSMUST00000100555 1278 ntBASIC20.93■□□□□ 0.94
Col1a2Q01149 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Col1a2Q01149 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.93■□□□□ 0.94
Col1a2Q01149 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col1a2Q01149 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Col1a2Q01149 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Col1a2Q01149 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC20.92■□□□□ 0.94
Col1a2Q01149 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.92■□□□□ 0.94
Col1a2Q01149 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col1a2Q01149 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col1a2Q01149 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col1a2Q01149 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col1a2Q01149 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Col1a2Q01149 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col1a2Q01149 Gm13884-201ENSMUST00000118103 829 ntBASIC20.91■□□□□ 0.94
Col1a2Q01149 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.91■□□□□ 0.94
Col1a2Q01149 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col1a2Q01149 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Col1a2Q01149 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.91■□□□□ 0.94
Col1a2Q01149 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.91■□□□□ 0.94
Col1a2Q01149 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Gm15165-201ENSMUST00000118140 502 ntBASIC20.9■□□□□ 0.94
Col1a2Q01149 Gm12644-201ENSMUST00000119935 606 ntBASIC20.9■□□□□ 0.94
Col1a2Q01149 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC20.9■□□□□ 0.94
Col1a2Q01149 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.9■□□□□ 0.94
Col1a2Q01149 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Col1a2Q01149 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.9■□□□□ 0.94
Col1a2Q01149 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Col1a2Q01149 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col1a2Q01149 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC20.89■□□□□ 0.94
Col1a2Q01149 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col1a2Q01149 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col1a2Q01149 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col1a2Q01149 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col1a2Q01149 Gm27867-201ENSMUST00000184778 125 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms