Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.1□□□□□ -0.15
SgcaP82350 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
SgcaP82350 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.1□□□□□ -0.15
SgcaP82350 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SgcaP82350 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcaP82350 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
SgcaP82350 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SgcaP82350 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.09□□□□□ -0.15
SgcaP82350 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcaP82350 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SgcaP82350 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SgcaP82350 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.09□□□□□ -0.15
SgcaP82350 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.09□□□□□ -0.15
SgcaP82350 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SgcaP82350 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SgcaP82350 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SgcaP82350 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcaP82350 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.08□□□□□ -0.15
SgcaP82350 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcaP82350 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SgcaP82350 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcaP82350 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SgcaP82350 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SgcaP82350 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SgcaP82350 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SgcaP82350 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SgcaP82350 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.08□□□□□ -0.16
SgcaP82350 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC14.08□□□□□ -0.16
SgcaP82350 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SgcaP82350 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Gm38285-201ENSMUST00000192928 922 ntBASIC14.08□□□□□ -0.16
SgcaP82350 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.08□□□□□ -0.16
SgcaP82350 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
SgcaP82350 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SgcaP82350 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SgcaP82350 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SgcaP82350 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SgcaP82350 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.08□□□□□ -0.16
SgcaP82350 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SgcaP82350 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
SgcaP82350 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SgcaP82350 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SgcaP82350 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms