Protein–RNA interactions for Protein: P70191

Traf5, TNF receptor-associated factor 5, mousemouse

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf5P70191 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf5P70191 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf5P70191 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf5P70191 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Traf5P70191 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
Traf5P70191 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Traf5P70191 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Traf5P70191 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Gm27867-201ENSMUST00000184778 125 ntBASIC19.45■□□□□ 0.7
Traf5P70191 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.45■□□□□ 0.7
Traf5P70191 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Traf5P70191 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Traf5P70191 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Traf5P70191 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.44■□□□□ 0.7
Traf5P70191 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC19.44■□□□□ 0.7
Traf5P70191 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC19.44■□□□□ 0.7
Traf5P70191 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Traf5P70191 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.44■□□□□ 0.7
Traf5P70191 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Traf5P70191 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Traf5P70191 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf5P70191 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf5P70191 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.43■□□□□ 0.7
Traf5P70191 AC153794.1-201ENSMUST00000169148 126 ntBASIC19.43■□□□□ 0.7
Traf5P70191 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Traf5P70191 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Traf5P70191 Gm7063-201ENSMUST00000186840 981 ntBASIC19.43■□□□□ 0.7
Traf5P70191 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.43■□□□□ 0.7
Traf5P70191 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.43■□□□□ 0.7
Traf5P70191 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Traf5P70191 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf5P70191 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Traf5P70191 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Traf5P70191 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Traf5P70191 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Traf5P70191 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.42■□□□□ 0.7
Traf5P70191 Gm10060-201ENSMUST00000212002 111 ntBASIC19.42■□□□□ 0.7
Traf5P70191 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Traf5P70191 Phf7-203ENSMUST00000226565 1971 ntBASIC19.42■□□□□ 0.7
Traf5P70191 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.42■□□□□ 0.7
Traf5P70191 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Traf5P70191 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.42■□□□□ 0.7
Traf5P70191 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.42■□□□□ 0.7
Traf5P70191 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Traf5P70191 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.41■□□□□ 0.7
Traf5P70191 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Traf5P70191 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Traf5P70191 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.4■□□□□ 0.7
Traf5P70191 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Traf5P70191 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf5P70191 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf5P70191 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf5P70191 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.4■□□□□ 0.7
Traf5P70191 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Traf5P70191 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Traf5P70191 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms