Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Gm15635-204ENSMUST00000208024 2539 ntBASIC15.69■□□□□ 0.1
Six5P70178 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.69■□□□□ 0.1
Six5P70178 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Six5P70178 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Six5P70178 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.69■□□□□ 0.1
Six5P70178 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Six5P70178 Gm18959-201ENSMUST00000208954 655 ntBASIC15.69■□□□□ 0.1
Six5P70178 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Six5P70178 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Six5P70178 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.68■□□□□ 0.1
Six5P70178 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.68■□□□□ 0.1
Six5P70178 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Six5P70178 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.68■□□□□ 0.1
Six5P70178 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Six5P70178 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.68■□□□□ 0.1
Six5P70178 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.67■□□□□ 0.1
Six5P70178 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Six5P70178 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.67■□□□□ 0.1
Six5P70178 Mir1668-201ENSMUST00000184114 107 ntBASIC15.67■□□□□ 0.1
Six5P70178 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.67■□□□□ 0.1
Six5P70178 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.67■□□□□ 0.1
Six5P70178 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Six5P70178 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Six5P70178 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.67■□□□□ 0.1
Six5P70178 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Six5P70178 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.66■□□□□ 0.1
Six5P70178 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.66■□□□□ 0.1
Six5P70178 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Six5P70178 Mir5130-201ENSMUST00000175160 84 ntBASIC15.66■□□□□ 0.1
Six5P70178 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Six5P70178 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.66■□□□□ 0.1
Six5P70178 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Six5P70178 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Six5P70178 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms