Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Gm8520-201ENSMUST00000186517 868 ntBASIC18.42■□□□□ 0.54
Hmgb1P63158 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.42■□□□□ 0.54
Hmgb1P63158 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb1P63158 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb1P63158 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb1P63158 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb1P63158 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Hmgb1P63158 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Hmgb1P63158 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Hmgb1P63158 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Hmgb1P63158 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Hmgb1P63158 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC18.4■□□□□ 0.54
Hmgb1P63158 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.4■□□□□ 0.54
Hmgb1P63158 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Hmgb1P63158 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Hmgb1P63158 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgb1P63158 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgb1P63158 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Hmgb1P63158 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Gm18958-201ENSMUST00000174258 762 ntBASIC18.39■□□□□ 0.53
Hmgb1P63158 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.39■□□□□ 0.53
Hmgb1P63158 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Odf3b-204ENSMUST00000227834 930 ntBASIC18.39■□□□□ 0.53
Hmgb1P63158 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Hmgb1P63158 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Hmgb1P63158 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hmgb1P63158 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hmgb1P63158 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hmgb1P63158 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.38■□□□□ 0.53
Hmgb1P63158 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.38■□□□□ 0.53
Hmgb1P63158 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hmgb1P63158 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms