Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm2P58774 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.29■□□□□ 0.68
Tpm2P58774 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.29■□□□□ 0.68
Tpm2P58774 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm2P58774 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm2P58774 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.29■□□□□ 0.68
Tpm2P58774 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC19.29■□□□□ 0.68
Tpm2P58774 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm2P58774 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm2P58774 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tpm2P58774 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.28■□□□□ 0.68
Tpm2P58774 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Gm10849-201ENSMUST00000100397 618 ntBASIC19.28■□□□□ 0.68
Tpm2P58774 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tpm2P58774 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Tpm2P58774 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
Tpm2P58774 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Tpm2P58774 Gm26571-201ENSMUST00000181399 666 ntBASIC19.27■□□□□ 0.68
Tpm2P58774 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.27■□□□□ 0.68
Tpm2P58774 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.27■□□□□ 0.68
Tpm2P58774 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tpm2P58774 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm2P58774 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tpm2P58774 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tpm2P58774 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tpm2P58774 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Tpm2P58774 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm2P58774 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm2P58774 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm2P58774 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.26■□□□□ 0.67
Tpm2P58774 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.26■□□□□ 0.67
Tpm2P58774 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.26■□□□□ 0.67
Tpm2P58774 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Tpm2P58774 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tpm2P58774 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tpm2P58774 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm2P58774 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tpm2P58774 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm2P58774 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm2P58774 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Tpm2P58774 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
Tpm2P58774 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.25■□□□□ 0.67
Tpm2P58774 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tpm2P58774 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tpm2P58774 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Tpm2P58774 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm2P58774 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms