Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.75■□□□□ 0.59
Tpm1P58771 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.75■□□□□ 0.59
Tpm1P58771 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tpm1P58771 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tpm1P58771 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tpm1P58771 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tpm1P58771 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC18.75■□□□□ 0.59
Tpm1P58771 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tpm1P58771 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tpm1P58771 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tpm1P58771 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC18.74■□□□□ 0.59
Tpm1P58771 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tpm1P58771 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tpm1P58771 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.74■□□□□ 0.59
Tpm1P58771 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.74■□□□□ 0.59
Tpm1P58771 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Tpm1P58771 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tpm1P58771 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tpm1P58771 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Tpm1P58771 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tpm1P58771 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.73■□□□□ 0.59
Tpm1P58771 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.73■□□□□ 0.59
Tpm1P58771 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Gm10138-203ENSMUST00000206952 366 ntBASIC18.73■□□□□ 0.59
Tpm1P58771 Mtag2-201ENSMUST00000058665 714 ntBASIC18.73■□□□□ 0.59
Tpm1P58771 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.73■□□□□ 0.59
Tpm1P58771 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tpm1P58771 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Tpm1P58771 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.72■□□□□ 0.59
Tpm1P58771 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.72■□□□□ 0.59
Tpm1P58771 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Tpm1P58771 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tpm1P58771 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.72■□□□□ 0.59
Tpm1P58771 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Tpm1P58771 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tpm1P58771 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.71■□□□□ 0.59
Tpm1P58771 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Tpm1P58771 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tpm1P58771 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.71■□□□□ 0.59
Tpm1P58771 Gm6576-201ENSMUST00000169678 883 ntBASIC18.71■□□□□ 0.59
Tpm1P58771 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Tpm1P58771 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
Tpm1P58771 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Tpm1P58771 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tpm1P58771 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tpm1P58771 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms