Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pdx1P52946 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pdx1P52946 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
Pdx1P52946 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Pdx1P52946 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.59■□□□□ 0.25
Pdx1P52946 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pdx1P52946 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Pdx1P52946 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.59■□□□□ 0.25
Pdx1P52946 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pdx1P52946 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.59■□□□□ 0.25
Pdx1P52946 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdx1P52946 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdx1P52946 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pdx1P52946 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.58■□□□□ 0.24
Pdx1P52946 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
Pdx1P52946 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pdx1P52946 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pdx1P52946 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pdx1P52946 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.57■□□□□ 0.24
Pdx1P52946 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Pdx1P52946 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pdx1P52946 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pdx1P52946 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pdx1P52946 Phf7-203ENSMUST00000226565 1971 ntBASIC16.57■□□□□ 0.24
Pdx1P52946 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pdx1P52946 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Gm13186-201ENSMUST00000118031 316 ntBASIC16.56■□□□□ 0.24
Pdx1P52946 Mir1668-201ENSMUST00000184114 107 ntBASIC16.56■□□□□ 0.24
Pdx1P52946 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pdx1P52946 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.56■□□□□ 0.24
Pdx1P52946 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pdx1P52946 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Pdx1P52946 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pdx1P52946 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.55■□□□□ 0.24
Pdx1P52946 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pdx1P52946 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.55■□□□□ 0.24
Pdx1P52946 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.55■□□□□ 0.24
Pdx1P52946 Gm18032-201ENSMUST00000222541 538 ntBASIC16.55■□□□□ 0.24
Pdx1P52946 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Pdx1P52946 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pdx1P52946 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.55■□□□□ 0.24
Pdx1P52946 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms