Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nkx2-1P50220 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Gm7291-201ENSMUST00000199147 382 ntBASIC13.93□□□□□ -0.18
Nkx2-1P50220 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nkx2-1P50220 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Gm12933-201ENSMUST00000120203 872 ntBASIC13.92□□□□□ -0.18
Nkx2-1P50220 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-1P50220 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.91□□□□□ -0.18
Nkx2-1P50220 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Mir5133-201ENSMUST00000174955 77 ntBASIC13.91□□□□□ -0.18
Nkx2-1P50220 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.91□□□□□ -0.18
Nkx2-1P50220 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Flg-201ENSMUST00000050758 1488 ntBASIC13.91□□□□□ -0.18
Nkx2-1P50220 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nkx2-1P50220 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-1P50220 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-1P50220 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms