Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hnf4aP49698 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Hnf4aP49698 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Hnf4aP49698 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.24■□□□□ 0.19
Hnf4aP49698 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC16.24■□□□□ 0.19
Hnf4aP49698 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Hnf4aP49698 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.24■□□□□ 0.19
Hnf4aP49698 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.24■□□□□ 0.19
Hnf4aP49698 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Hnf4aP49698 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.23■□□□□ 0.19
Hnf4aP49698 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
Hnf4aP49698 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.23■□□□□ 0.19
Hnf4aP49698 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Hnf4aP49698 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.23■□□□□ 0.19
Hnf4aP49698 Gm18958-201ENSMUST00000174258 762 ntBASIC16.23■□□□□ 0.19
Hnf4aP49698 Gm27463-201ENSMUST00000183569 57 ntBASIC16.23■□□□□ 0.19
Hnf4aP49698 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.23■□□□□ 0.19
Hnf4aP49698 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.23■□□□□ 0.19
Hnf4aP49698 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Hnf4aP49698 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.22■□□□□ 0.19
Hnf4aP49698 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.22■□□□□ 0.19
Hnf4aP49698 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Hnf4aP49698 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.22■□□□□ 0.19
Hnf4aP49698 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Hnf4aP49698 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Hnf4aP49698 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC16.21■□□□□ 0.19
Hnf4aP49698 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hnf4aP49698 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hnf4aP49698 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hnf4aP49698 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hnf4aP49698 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Hnf4aP49698 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hnf4aP49698 Gm13216-201ENSMUST00000117145 591 ntBASIC16.21■□□□□ 0.19
Hnf4aP49698 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hnf4aP49698 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Hnf4aP49698 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hnf4aP49698 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Hnf4aP49698 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Hnf4aP49698 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Hnf4aP49698 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Hnf4aP49698 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.2■□□□□ 0.18
Hnf4aP49698 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Hnf4aP49698 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.2■□□□□ 0.18
Hnf4aP49698 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms