Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rfx2P48379 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Rfx2P48379 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.58■□□□□ 0.4
Rfx2P48379 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Rfx2P48379 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rfx2P48379 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.58■□□□□ 0.4
Rfx2P48379 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rfx2P48379 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Rfx2P48379 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rfx2P48379 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Gm11355-201ENSMUST00000121120 306 ntBASIC17.57■□□□□ 0.4
Rfx2P48379 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.57■□□□□ 0.4
Rfx2P48379 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Rfx2P48379 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rfx2P48379 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.56■□□□□ 0.4
Rfx2P48379 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfx2P48379 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.56■□□□□ 0.4
Rfx2P48379 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.56■□□□□ 0.4
Rfx2P48379 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Rfx2P48379 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rfx2P48379 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.56■□□□□ 0.4
Rfx2P48379 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rfx2P48379 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rfx2P48379 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Gm37166-201ENSMUST00000195473 2474 ntBASIC17.55■□□□□ 0.4
Rfx2P48379 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfx2P48379 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.55■□□□□ 0.4
Rfx2P48379 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfx2P48379 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.55■□□□□ 0.4
Rfx2P48379 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC17.55■□□□□ 0.4
Rfx2P48379 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rfx2P48379 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Rfx2P48379 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.55■□□□□ 0.4
Rfx2P48379 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rfx2P48379 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.54■□□□□ 0.4
Rfx2P48379 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Gm26039-201ENSMUST00000158152 144 ntBASIC17.54■□□□□ 0.4
Rfx2P48379 Gm18958-201ENSMUST00000174258 762 ntBASIC17.54■□□□□ 0.4
Rfx2P48379 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rfx2P48379 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Rfx2P48379 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rfx2P48379 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Rfx2P48379 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rfx2P48379 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rfx2P48379 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC17.53■□□□□ 0.4
Rfx2P48379 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.53■□□□□ 0.4
Rfx2P48379 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms