Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.77■□□□□ 0.12
Sox6P40645 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Sox6P40645 Gm10698-201ENSMUST00000182663 604 ntBASIC15.77■□□□□ 0.12
Sox6P40645 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox6P40645 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.77■□□□□ 0.12
Sox6P40645 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sox6P40645 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.77■□□□□ 0.11
Sox6P40645 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.77■□□□□ 0.11
Sox6P40645 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sox6P40645 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.76■□□□□ 0.11
Sox6P40645 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.76■□□□□ 0.11
Sox6P40645 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.76■□□□□ 0.11
Sox6P40645 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sox6P40645 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Sox6P40645 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sox6P40645 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox6P40645 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Sox6P40645 Gm43183-201ENSMUST00000200632 547 ntBASIC15.75■□□□□ 0.11
Sox6P40645 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sox6P40645 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.75■□□□□ 0.11
Sox6P40645 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Sox6P40645 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sox6P40645 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Gm5421-201ENSMUST00000181698 2354 ntBASIC15.75■□□□□ 0.11
Sox6P40645 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sox6P40645 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Sox6P40645 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Sox6P40645 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Sox6P40645 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.74■□□□□ 0.11
Sox6P40645 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.74■□□□□ 0.11
Sox6P40645 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.74■□□□□ 0.11
Sox6P40645 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC15.74■□□□□ 0.11
Sox6P40645 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.74■□□□□ 0.11
Sox6P40645 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.74■□□□□ 0.11
Sox6P40645 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 AC124581.1-201ENSMUST00000225416 1399 ntBASIC15.74■□□□□ 0.11
Sox6P40645 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sox6P40645 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Sox6P40645 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Sox6P40645 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Sox6P40645 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.73■□□□□ 0.11
Sox6P40645 Gm6576-201ENSMUST00000169678 883 ntBASIC15.73■□□□□ 0.11
Sox6P40645 Gm37292-201ENSMUST00000192062 758 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms