Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Timp3P39876 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Timp3P39876 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Timp3P39876 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC13.73□□□□□ -0.21
Timp3P39876 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Timp3P39876 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.73□□□□□ -0.21
Timp3P39876 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.73□□□□□ -0.21
Timp3P39876 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.73□□□□□ -0.21
Timp3P39876 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.73□□□□□ -0.21
Timp3P39876 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Timp3P39876 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.73□□□□□ -0.21
Timp3P39876 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Timp3P39876 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Timp3P39876 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Timp3P39876 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.72□□□□□ -0.21
Timp3P39876 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 Gm6345-202ENSMUST00000180900 204 ntBASIC13.72□□□□□ -0.21
Timp3P39876 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.72□□□□□ -0.21
Timp3P39876 Gm7367-201ENSMUST00000057611 492 ntBASIC13.72□□□□□ -0.21
Timp3P39876 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC13.72□□□□□ -0.21
Timp3P39876 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Timp3P39876 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.71□□□□□ -0.21
Timp3P39876 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Timp3P39876 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Timp3P39876 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Gm33142-201ENSMUST00000193913 867 ntBASIC13.71□□□□□ -0.21
Timp3P39876 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Timp3P39876 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC13.71□□□□□ -0.21
Timp3P39876 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Timp3P39876 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.71□□□□□ -0.21
Timp3P39876 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Timp3P39876 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Timp3P39876 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Timp3P39876 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Timp3P39876 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Timp3P39876 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Timp3P39876 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Timp3P39876 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Timp3P39876 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.7□□□□□ -0.22
Timp3P39876 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Timp3P39876 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Timp3P39876 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Timp3P39876 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Timp3P39876 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms