Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox5P35710 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox5P35710 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox5P35710 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sox5P35710 Gm12527-201ENSMUST00000117967 564 ntBASIC18.33■□□□□ 0.52
Sox5P35710 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC18.33■□□□□ 0.52
Sox5P35710 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Trmt13-210ENSMUST00000198454 880 ntBASIC18.33■□□□□ 0.52
Sox5P35710 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
Sox5P35710 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Sox5P35710 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.33■□□□□ 0.52
Sox5P35710 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sox5P35710 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Sox5P35710 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sox5P35710 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.32■□□□□ 0.52
Sox5P35710 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sox5P35710 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sox5P35710 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sox5P35710 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Sox5P35710 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Sox5P35710 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Sox5P35710 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Sox5P35710 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sox5P35710 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.3■□□□□ 0.52
Sox5P35710 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
Sox5P35710 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.3■□□□□ 0.52
Sox5P35710 Gm9731-201ENSMUST00000209480 747 ntBASIC18.3■□□□□ 0.52
Sox5P35710 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sox5P35710 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC18.3■□□□□ 0.52
Sox5P35710 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sox5P35710 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.29■□□□□ 0.52
Sox5P35710 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sox5P35710 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.29■□□□□ 0.52
Sox5P35710 Gm5643-201ENSMUST00000117081 966 ntBASIC18.29■□□□□ 0.52
Sox5P35710 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.29■□□□□ 0.52
Sox5P35710 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC18.29■□□□□ 0.52
Sox5P35710 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Sox5P35710 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.29■□□□□ 0.52
Sox5P35710 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Sox5P35710 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sox5P35710 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sox5P35710 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sox5P35710 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms