Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Foxa1P35582 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.51■□□□□ 0.07
Foxa1P35582 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Foxa1P35582 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.51■□□□□ 0.07
Foxa1P35582 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Foxa1P35582 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Foxa1P35582 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.5■□□□□ 0.07
Foxa1P35582 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Foxa1P35582 Actl10-202ENSMUST00000226583 1501 ntBASIC15.5■□□□□ 0.07
Foxa1P35582 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.5■□□□□ 0.07
Foxa1P35582 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Gm10231-201ENSMUST00000181584 441 ntBASIC15.5■□□□□ 0.07
Foxa1P35582 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Gm10175-202ENSMUST00000208752 441 ntBASIC15.5■□□□□ 0.07
Foxa1P35582 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Foxa1P35582 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Foxa1P35582 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Foxa1P35582 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Foxa1P35582 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Foxa1P35582 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Foxa1P35582 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.49■□□□□ 0.07
Foxa1P35582 Mir1668-201ENSMUST00000184114 107 ntBASIC15.49■□□□□ 0.07
Foxa1P35582 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Foxa1P35582 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.49■□□□□ 0.07
Foxa1P35582 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Foxa1P35582 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Foxa1P35582 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Foxa1P35582 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Foxa1P35582 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.48■□□□□ 0.07
Foxa1P35582 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Foxa1P35582 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.48■□□□□ 0.07
Foxa1P35582 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.48■□□□□ 0.07
Foxa1P35582 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Foxa1P35582 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms