Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a11P31650 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a11P31650 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a11P31650 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a11P31650 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Slc6a11P31650 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.92■□□□□ 0.14
Slc6a11P31650 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.92■□□□□ 0.14
Slc6a11P31650 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Gm8668-201ENSMUST00000120559 1447 ntBASIC15.92■□□□□ 0.14
Slc6a11P31650 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Slc6a11P31650 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Slc6a11P31650 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Slc6a11P31650 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
Slc6a11P31650 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Slc6a11P31650 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Slc6a11P31650 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Slc6a11P31650 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Slc6a11P31650 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Slc6a11P31650 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.91■□□□□ 0.14
Slc6a11P31650 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Slc6a11P31650 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Slc6a11P31650 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Slc6a11P31650 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.9■□□□□ 0.14
Slc6a11P31650 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.9■□□□□ 0.14
Slc6a11P31650 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Slc6a11P31650 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Slc6a11P31650 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.9■□□□□ 0.14
Slc6a11P31650 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Slc6a11P31650 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Dancr-204ENSMUST00000132389 2347 ntBASIC15.89■□□□□ 0.13
Slc6a11P31650 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Slc6a11P31650 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.89■□□□□ 0.13
Slc6a11P31650 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.89■□□□□ 0.13
Slc6a11P31650 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.89■□□□□ 0.13
Slc6a11P31650 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Slc6a11P31650 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Slc6a11P31650 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Slc6a11P31650 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.88■□□□□ 0.13
Slc6a11P31650 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Slc6a11P31650 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.88■□□□□ 0.13
Slc6a11P31650 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC15.88■□□□□ 0.13
Slc6a11P31650 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Slc6a11P31650 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms