Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.46□□□□□ -0.09
Slc6a1P31648 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.46□□□□□ -0.09
Slc6a1P31648 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
Slc6a1P31648 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Slc6a1P31648 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Slc6a1P31648 Nespas-201ENSMUST00000143738 1083 ntBASIC14.46□□□□□ -0.09
Slc6a1P31648 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC14.46□□□□□ -0.09
Slc6a1P31648 Gm5408-201ENSMUST00000197998 747 ntBASIC14.46□□□□□ -0.09
Slc6a1P31648 Gm29791-202ENSMUST00000207888 369 ntBASIC14.46□□□□□ -0.09
Slc6a1P31648 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Slc6a1P31648 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Slc6a1P31648 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Slc6a1P31648 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a1P31648 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a1P31648 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a1P31648 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Slc6a1P31648 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.46□□□□□ -0.1
Slc6a1P31648 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Slc6a1P31648 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc6a1P31648 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.45□□□□□ -0.1
Slc6a1P31648 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.45□□□□□ -0.1
Slc6a1P31648 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc6a1P31648 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Slc6a1P31648 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Slc6a1P31648 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Slc6a1P31648 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Slc6a1P31648 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Slc6a1P31648 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.44□□□□□ -0.1
Slc6a1P31648 Gm20760-201ENSMUST00000179197 648 ntBASIC14.44□□□□□ -0.1
Slc6a1P31648 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Slc6a1P31648 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Slc6a1P31648 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Slc6a1P31648 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Slc6a1P31648 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Slc6a1P31648 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Slc6a1P31648 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.43□□□□□ -0.1
Slc6a1P31648 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Slc6a1P31648 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms