Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.26■□□□□ 0.67
Vcam1P29533 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.26■□□□□ 0.67
Vcam1P29533 Gm27867-201ENSMUST00000184778 125 ntBASIC19.26■□□□□ 0.67
Vcam1P29533 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.26■□□□□ 0.67
Vcam1P29533 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Vcam1P29533 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.25■□□□□ 0.67
Vcam1P29533 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.25■□□□□ 0.67
Vcam1P29533 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.25■□□□□ 0.67
Vcam1P29533 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.25■□□□□ 0.67
Vcam1P29533 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Vcam1P29533 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Vcam1P29533 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Vcam1P29533 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcam1P29533 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vcam1P29533 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcam1P29533 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vcam1P29533 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Vcam1P29533 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcam1P29533 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.24■□□□□ 0.67
Vcam1P29533 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vcam1P29533 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Vcam1P29533 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC19.24■□□□□ 0.67
Vcam1P29533 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Vcam1P29533 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.24■□□□□ 0.67
Vcam1P29533 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Vcam1P29533 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.24■□□□□ 0.67
Vcam1P29533 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Vcam1P29533 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.24■□□□□ 0.67
Vcam1P29533 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Gm15165-201ENSMUST00000118140 502 ntBASIC19.23■□□□□ 0.67
Vcam1P29533 Gm11452-201ENSMUST00000122376 690 ntBASIC19.23■□□□□ 0.67
Vcam1P29533 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Vcam1P29533 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Vcam1P29533 Gm44454-201ENSMUST00000198541 138 ntBASIC19.23■□□□□ 0.67
Vcam1P29533 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC19.23■□□□□ 0.67
Vcam1P29533 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.23■□□□□ 0.67
Vcam1P29533 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Vcam1P29533 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.23■□□□□ 0.67
Vcam1P29533 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Vcam1P29533 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcam1P29533 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcam1P29533 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcam1P29533 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcam1P29533 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.22■□□□□ 0.67
Vcam1P29533 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vcam1P29533 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Vcam1P29533 CT009713.7-201ENSMUST00000224689 571 ntBASIC19.22■□□□□ 0.67
Vcam1P29533 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Vcam1P29533 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.22■□□□□ 0.67
Vcam1P29533 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vcam1P29533 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.21■□□□□ 0.67
Vcam1P29533 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcam1P29533 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Vcam1P29533 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Vcam1P29533 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.21■□□□□ 0.67
Vcam1P29533 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.21■□□□□ 0.67
Vcam1P29533 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vcam1P29533 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Vcam1P29533 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Vcam1P29533 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.2■□□□□ 0.66
Vcam1P29533 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Vcam1P29533 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms