Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Col2a1P28481 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.99■□□□□ 0.63
Col2a1P28481 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.99■□□□□ 0.63
Col2a1P28481 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col2a1P28481 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col2a1P28481 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col2a1P28481 Gm11841-201ENSMUST00000117060 1963 ntBASIC18.98■□□□□ 0.63
Col2a1P28481 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Col2a1P28481 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.98■□□□□ 0.63
Col2a1P28481 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.98■□□□□ 0.63
Col2a1P28481 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.98■□□□□ 0.63
Col2a1P28481 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC18.98■□□□□ 0.63
Col2a1P28481 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Col2a1P28481 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col2a1P28481 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Col2a1P28481 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col2a1P28481 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col2a1P28481 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Col2a1P28481 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Col2a1P28481 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
Col2a1P28481 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.97■□□□□ 0.63
Col2a1P28481 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.97■□□□□ 0.63
Col2a1P28481 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col2a1P28481 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col2a1P28481 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col2a1P28481 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col2a1P28481 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Col2a1P28481 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.97■□□□□ 0.63
Col2a1P28481 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col2a1P28481 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.97■□□□□ 0.63
Col2a1P28481 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col2a1P28481 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col2a1P28481 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.96■□□□□ 0.63
Col2a1P28481 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.96■□□□□ 0.63
Col2a1P28481 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Col2a1P28481 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.96■□□□□ 0.63
Col2a1P28481 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.96■□□□□ 0.63
Col2a1P28481 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col2a1P28481 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.95■□□□□ 0.62
Col2a1P28481 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.95■□□□□ 0.62
Col2a1P28481 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col2a1P28481 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col2a1P28481 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.95■□□□□ 0.62
Col2a1P28481 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.94■□□□□ 0.62
Col2a1P28481 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.94■□□□□ 0.62
Col2a1P28481 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.94■□□□□ 0.62
Col2a1P28481 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Col2a1P28481 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Col2a1P28481 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Col2a1P28481 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col2a1P28481 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.93■□□□□ 0.62
Col2a1P28481 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col2a1P28481 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col2a1P28481 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col2a1P28481 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col2a1P28481 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col2a1P28481 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col2a1P28481 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col2a1P28481 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms