Protein–RNA interactions for Protein: P28230

Gjb1, Gap junction beta-1 protein, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gjb1P28230 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Gjb1P28230 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.69■□□□□ 0.58
Gjb1P28230 Gm7230-201ENSMUST00000173026 815 ntBASIC18.69■□□□□ 0.58
Gjb1P28230 Gm27000-201ENSMUST00000182943 842 ntBASIC18.69■□□□□ 0.58
Gjb1P28230 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Gjb1P28230 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.69■□□□□ 0.58
Gjb1P28230 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.69■□□□□ 0.58
Gjb1P28230 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.69■□□□□ 0.58
Gjb1P28230 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.69■□□□□ 0.58
Gjb1P28230 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Gjb1P28230 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.68■□□□□ 0.58
Gjb1P28230 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Gjb1P28230 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Gjb1P28230 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.68■□□□□ 0.58
Gjb1P28230 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Gjb1P28230 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.68■□□□□ 0.58
Gjb1P28230 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Gjb1P28230 Gm15590-201ENSMUST00000078419 552 ntBASIC18.68■□□□□ 0.58
Gjb1P28230 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 AC125311.2-201ENSMUST00000227477 1940 ntBASIC18.68■□□□□ 0.58
Gjb1P28230 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Gjb1P28230 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gjb1P28230 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gjb1P28230 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Gjb1P28230 Gm29707-201ENSMUST00000196325 491 ntBASIC18.67■□□□□ 0.58
Gjb1P28230 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.67■□□□□ 0.58
Gjb1P28230 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.67■□□□□ 0.58
Gjb1P28230 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gjb1P28230 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gjb1P28230 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Gjb1P28230 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gjb1P28230 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Gjb1P28230 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gjb1P28230 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Gjb1P28230 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Gjb1P28230 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Gm25990-201ENSMUST00000102440 86 ntBASIC18.66■□□□□ 0.58
Gjb1P28230 Gm15920-201ENSMUST00000118998 402 ntBASIC18.66■□□□□ 0.58
Gjb1P28230 Gm14140-201ENSMUST00000119999 995 ntBASIC18.66■□□□□ 0.58
Gjb1P28230 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.66■□□□□ 0.58
Gjb1P28230 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.66■□□□□ 0.58
Gjb1P28230 Gm9727-201ENSMUST00000161387 555 ntBASIC18.66■□□□□ 0.58
Gjb1P28230 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.66■□□□□ 0.58
Gjb1P28230 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.66■□□□□ 0.58
Gjb1P28230 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Gjb1P28230 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Gjb1P28230 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC18.65■□□□□ 0.58
Gjb1P28230 Gm15173-201ENSMUST00000122049 433 ntBASIC18.65■□□□□ 0.58
Gjb1P28230 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.65■□□□□ 0.58
Gjb1P28230 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Gjb1P28230 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.65■□□□□ 0.58
Gjb1P28230 Gm45683-201ENSMUST00000210825 1247 ntBASIC18.65■□□□□ 0.58
Gjb1P28230 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 CT009713.7-201ENSMUST00000224689 571 ntBASIC18.65■□□□□ 0.58
Gjb1P28230 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.65■□□□□ 0.58
Gjb1P28230 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.65■□□□□ 0.58
Gjb1P28230 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Gjb1P28230 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.64■□□□□ 0.58
Gjb1P28230 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Gjb1P28230 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Gjb1P28230 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gjb1P28230 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Gjb1P28230 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms