Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Col8a2P25318 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC14□□□□□ -0.17
Col8a2P25318 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Gm11336-201ENSMUST00000118168 334 ntBASIC14□□□□□ -0.17
Col8a2P25318 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14□□□□□ -0.17
Col8a2P25318 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14□□□□□ -0.17
Col8a2P25318 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col8a2P25318 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14□□□□□ -0.17
Col8a2P25318 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Col8a2P25318 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col8a2P25318 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.99□□□□□ -0.17
Col8a2P25318 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Gm6623-201ENSMUST00000173570 544 ntBASIC13.99□□□□□ -0.17
Col8a2P25318 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Col8a2P25318 Gm27704-201ENSMUST00000185094 107 ntBASIC13.99□□□□□ -0.17
Col8a2P25318 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Col8a2P25318 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.99□□□□□ -0.17
Col8a2P25318 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Col8a2P25318 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Col8a2P25318 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Col8a2P25318 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Col8a2P25318 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.98□□□□□ -0.17
Col8a2P25318 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.98□□□□□ -0.17
Col8a2P25318 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Col8a2P25318 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Col8a2P25318 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Gm9013-201ENSMUST00000132939 882 ntBASIC13.97□□□□□ -0.17
Col8a2P25318 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Gm25016-201ENSMUST00000158399 131 ntBASIC13.97□□□□□ -0.17
Col8a2P25318 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Col8a2P25318 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Col8a2P25318 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Col8a2P25318 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Col8a2P25318 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Col8a2P25318 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.96□□□□□ -0.17
Col8a2P25318 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC13.96□□□□□ -0.17
Col8a2P25318 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC13.96□□□□□ -0.17
Col8a2P25318 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Col8a2P25318 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms