Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Pde6bP23440 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Pde6bP23440 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Pde6bP23440 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Pde6bP23440 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Pde6bP23440 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pde6bP23440 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Pde6bP23440 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Pde6bP23440 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Pde6bP23440 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC18.24■□□□□ 0.51
Pde6bP23440 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pde6bP23440 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Pde6bP23440 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.23■□□□□ 0.51
Pde6bP23440 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Pde6bP23440 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pde6bP23440 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.23■□□□□ 0.51
Pde6bP23440 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.23■□□□□ 0.51
Pde6bP23440 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Pde6bP23440 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.23■□□□□ 0.51
Pde6bP23440 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pde6bP23440 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC18.22■□□□□ 0.51
Pde6bP23440 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Pde6bP23440 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Pde6bP23440 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.21■□□□□ 0.51
Pde6bP23440 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC18.21■□□□□ 0.51
Pde6bP23440 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pde6bP23440 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.21■□□□□ 0.51
Pde6bP23440 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Pde6bP23440 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pde6bP23440 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Pde6bP23440 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Pde6bP23440 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Pde6bP23440 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms