Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
VimP20152 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
VimP20152 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.14■□□□□ 0.33
VimP20152 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
VimP20152 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.14■□□□□ 0.33
VimP20152 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
VimP20152 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
VimP20152 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.13■□□□□ 0.33
VimP20152 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VimP20152 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VimP20152 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VimP20152 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Gm10418-201ENSMUST00000100943 576 ntBASIC17.13■□□□□ 0.33
VimP20152 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.13■□□□□ 0.33
VimP20152 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.13■□□□□ 0.33
VimP20152 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
VimP20152 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
VimP20152 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
VimP20152 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
VimP20152 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VimP20152 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VimP20152 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC17.12■□□□□ 0.33
VimP20152 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
VimP20152 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
VimP20152 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.12■□□□□ 0.33
VimP20152 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.12■□□□□ 0.33
VimP20152 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VimP20152 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
VimP20152 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC17.12■□□□□ 0.33
VimP20152 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VimP20152 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VimP20152 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.11■□□□□ 0.33
VimP20152 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.11■□□□□ 0.33
VimP20152 Gm9988-201ENSMUST00000069786 435 ntBASIC17.11■□□□□ 0.33
VimP20152 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC17.11■□□□□ 0.33
VimP20152 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
VimP20152 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.11■□□□□ 0.33
VimP20152 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VimP20152 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.1■□□□□ 0.33
VimP20152 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VimP20152 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VimP20152 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.1■□□□□ 0.33
VimP20152 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
VimP20152 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.1■□□□□ 0.33
VimP20152 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
VimP20152 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VimP20152 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
VimP20152 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms