Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Cdx1P18111 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Cdx1P18111 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Cdx1P18111 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdx1P18111 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.56□□□□□ -0.24
Cdx1P18111 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Cdx1P18111 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Cdx1P18111 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Cdx1P18111 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx1P18111 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
Cdx1P18111 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdx1P18111 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cdx1P18111 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx1P18111 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.55□□□□□ -0.24
Cdx1P18111 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
Cdx1P18111 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Cdx1P18111 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Cdx1P18111 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cdx1P18111 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdx1P18111 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdx1P18111 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdx1P18111 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdx1P18111 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdx1P18111 Gm13509-201ENSMUST00000119733 1308 ntBASIC13.54□□□□□ -0.24
Cdx1P18111 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdx1P18111 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdx1P18111 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Cdx1P18111 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdx1P18111 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdx1P18111 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cdx1P18111 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdx1P18111 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cdx1P18111 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdx1P18111 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdx1P18111 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Cdx1P18111 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms