Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp53P15975 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp53P15975 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp53P15975 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Usp53P15975 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.7
Usp53P15975 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Usp53P15975 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Usp53P15975 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Usp53P15975 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.39■□□□□ 0.69
Usp53P15975 Gm45328-201ENSMUST00000210942 917 ntBASIC19.39■□□□□ 0.69
Usp53P15975 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.39■□□□□ 0.69
Usp53P15975 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.39■□□□□ 0.69
Usp53P15975 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Usp53P15975 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC19.39■□□□□ 0.69
Usp53P15975 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.39■□□□□ 0.69
Usp53P15975 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Usp53P15975 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.38■□□□□ 0.69
Usp53P15975 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Gm15794-201ENSMUST00000120182 631 ntBASIC19.38■□□□□ 0.69
Usp53P15975 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.38■□□□□ 0.69
Usp53P15975 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Usp53P15975 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.38■□□□□ 0.69
Usp53P15975 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Usp53P15975 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp53P15975 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp53P15975 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.37■□□□□ 0.69
Usp53P15975 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Usp53P15975 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.36■□□□□ 0.69
Usp53P15975 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.36■□□□□ 0.69
Usp53P15975 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Gm17807-201ENSMUST00000186869 298 ntBASIC19.36■□□□□ 0.69
Usp53P15975 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Usp53P15975 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC19.36■□□□□ 0.69
Usp53P15975 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Usp53P15975 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Usp53P15975 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.35■□□□□ 0.69
Usp53P15975 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.35■□□□□ 0.69
Usp53P15975 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Usp53P15975 Gm28033-201ENSMUST00000184224 96 ntBASIC19.35■□□□□ 0.69
Usp53P15975 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.35■□□□□ 0.69
Usp53P15975 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Usp53P15975 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp53P15975 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp53P15975 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp53P15975 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp53P15975 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Usp53P15975 Gm29707-201ENSMUST00000196325 491 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms