Protein–RNA interactions for Protein: P15533

Trim30a, Tripartite motif-containing protein 30A, mousemouse

Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30aP15533 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim30aP15533 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim30aP15533 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Trim30aP15533 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim30aP15533 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trim30aP15533 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim30aP15533 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trim30aP15533 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Trim30aP15533 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Trim30aP15533 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.52■□□□□ 0.56
Trim30aP15533 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trim30aP15533 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.52■□□□□ 0.56
Trim30aP15533 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trim30aP15533 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trim30aP15533 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim30aP15533 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC18.52■□□□□ 0.55
Trim30aP15533 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim30aP15533 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim30aP15533 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Trim30aP15533 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
Trim30aP15533 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
Trim30aP15533 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim30aP15533 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Trim30aP15533 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim30aP15533 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Trim30aP15533 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim30aP15533 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim30aP15533 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.51■□□□□ 0.55
Trim30aP15533 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.51■□□□□ 0.55
Trim30aP15533 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.51■□□□□ 0.55
Trim30aP15533 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Trim30aP15533 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trim30aP15533 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim30aP15533 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Trim30aP15533 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.5■□□□□ 0.55
Trim30aP15533 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.5■□□□□ 0.55
Trim30aP15533 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trim30aP15533 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim30aP15533 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
Trim30aP15533 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
Trim30aP15533 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.49■□□□□ 0.55
Trim30aP15533 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trim30aP15533 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.49■□□□□ 0.55
Trim30aP15533 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trim30aP15533 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30aP15533 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30aP15533 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30aP15533 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30aP15533 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trim30aP15533 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms