Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rb1P13405 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Rb1P13405 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rb1P13405 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.13■□□□□ 0.33
Rb1P13405 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rb1P13405 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rb1P13405 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rb1P13405 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rb1P13405 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Rb1P13405 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.12■□□□□ 0.33
Rb1P13405 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Rb1P13405 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.12■□□□□ 0.33
Rb1P13405 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Gm27704-201ENSMUST00000185094 107 ntBASIC17.12■□□□□ 0.33
Rb1P13405 Gm7791-201ENSMUST00000219066 539 ntBASIC17.12■□□□□ 0.33
Rb1P13405 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Rb1P13405 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.12■□□□□ 0.33
Rb1P13405 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.12■□□□□ 0.33
Rb1P13405 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Rb1P13405 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.11■□□□□ 0.33
Rb1P13405 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.11■□□□□ 0.33
Rb1P13405 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.11■□□□□ 0.33
Rb1P13405 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.11■□□□□ 0.33
Rb1P13405 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rb1P13405 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.1■□□□□ 0.33
Rb1P13405 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.1■□□□□ 0.33
Rb1P13405 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.1■□□□□ 0.33
Rb1P13405 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rb1P13405 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rb1P13405 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.1■□□□□ 0.33
Rb1P13405 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rb1P13405 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rb1P13405 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.09■□□□□ 0.33
Rb1P13405 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.09■□□□□ 0.33
Rb1P13405 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Rb1P13405 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.09■□□□□ 0.33
Rb1P13405 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.09■□□□□ 0.33
Rb1P13405 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rb1P13405 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rb1P13405 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rb1P13405 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.33
Rb1P13405 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Rb1P13405 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rb1P13405 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Rb1P13405 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rb1P13405 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rb1P13405 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rb1P13405 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rb1P13405 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms