Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RaraP11416 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RaraP11416 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RaraP11416 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RaraP11416 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC18.13■□□□□ 0.49
RaraP11416 Mir1199-201ENSMUST00000117015 119 ntBASIC18.13■□□□□ 0.49
RaraP11416 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Gm16042-201ENSMUST00000204813 1247 ntBASIC18.13■□□□□ 0.49
RaraP11416 Il3ra-202ENSMUST00000223589 738 ntBASIC18.13■□□□□ 0.49
RaraP11416 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Dancr-204ENSMUST00000132389 2347 ntBASIC18.13■□□□□ 0.49
RaraP11416 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.13■□□□□ 0.49
RaraP11416 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RaraP11416 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RaraP11416 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RaraP11416 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RaraP11416 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.12■□□□□ 0.49
RaraP11416 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.12■□□□□ 0.49
RaraP11416 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RaraP11416 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RaraP11416 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC18.11■□□□□ 0.49
RaraP11416 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RaraP11416 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RaraP11416 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC18.11■□□□□ 0.49
RaraP11416 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RaraP11416 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
RaraP11416 Gm20760-201ENSMUST00000179197 648 ntBASIC18.1■□□□□ 0.49
RaraP11416 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.1■□□□□ 0.49
RaraP11416 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC18.1■□□□□ 0.49
RaraP11416 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RaraP11416 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RaraP11416 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.09■□□□□ 0.49
RaraP11416 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RaraP11416 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.09■□□□□ 0.49
RaraP11416 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RaraP11416 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.09■□□□□ 0.49
RaraP11416 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.09■□□□□ 0.49
RaraP11416 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.09■□□□□ 0.49
RaraP11416 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.09■□□□□ 0.49
RaraP11416 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RaraP11416 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms