Protein–RNA interactions for Protein: P0DP28

Calm3, Calmodulin-3, mousemouse

Known RBP Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calm3P0DP28 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calm3P0DP28 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calm3P0DP28 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Calm3P0DP28 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calm3P0DP28 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Calm3P0DP28 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calm3P0DP28 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Calm3P0DP28 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Calm3P0DP28 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Calm3P0DP28 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Calm3P0DP28 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Calm3P0DP28 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Calm3P0DP28 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Calm3P0DP28 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Gm44450-201ENSMUST00000199528 114 ntBASIC19.33■□□□□ 0.68
Calm3P0DP28 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.33■□□□□ 0.68
Calm3P0DP28 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Calm3P0DP28 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Calm3P0DP28 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Calm3P0DP28 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Calm3P0DP28 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Calm3P0DP28 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Gm6659-201ENSMUST00000174752 547 ntBASIC19.32■□□□□ 0.68
Calm3P0DP28 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Calm3P0DP28 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.32■□□□□ 0.68
Calm3P0DP28 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.32■□□□□ 0.68
Calm3P0DP28 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.32■□□□□ 0.68
Calm3P0DP28 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Calm3P0DP28 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Calm3P0DP28 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.31■□□□□ 0.68
Calm3P0DP28 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Calm3P0DP28 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.31■□□□□ 0.68
Calm3P0DP28 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.31■□□□□ 0.68
Calm3P0DP28 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Calm3P0DP28 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Calm3P0DP28 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Calm3P0DP28 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.3■□□□□ 0.68
Calm3P0DP28 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.3■□□□□ 0.68
Calm3P0DP28 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Gm9013-201ENSMUST00000132939 882 ntBASIC19.3■□□□□ 0.68
Calm3P0DP28 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.3■□□□□ 0.68
Calm3P0DP28 Gm37722-201ENSMUST00000193757 208 ntBASIC19.3■□□□□ 0.68
Calm3P0DP28 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC19.3■□□□□ 0.68
Calm3P0DP28 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.3■□□□□ 0.68
Calm3P0DP28 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Calm3P0DP28 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Calm3P0DP28 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Calm3P0DP28 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.29■□□□□ 0.68
Calm3P0DP28 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Calm3P0DP28 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Calm3P0DP28 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Calm3P0DP28 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC19.29■□□□□ 0.68
Calm3P0DP28 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.29■□□□□ 0.68
Calm3P0DP28 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Calm3P0DP28 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Calm3P0DP28 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Calm3P0DP28 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Calm3P0DP28 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms