Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Gm8258-201ENSMUST00000055593 1449 ntBASIC14□□□□□ -0.17
Ly6c1P0CW02 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
Ly6c1P0CW02 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Ly6c1P0CW02 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Gm11434-201ENSMUST00000122379 629 ntBASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Gm37722-201ENSMUST00000193757 208 ntBASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 AC130671.1-201ENSMUST00000227384 1237 ntBASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ly6c1P0CW02 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Gm11336-201ENSMUST00000118168 334 ntBASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Gm6345-202ENSMUST00000180900 204 ntBASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.98□□□□□ -0.17
Ly6c1P0CW02 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ly6c1P0CW02 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ly6c1P0CW02 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms