Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
PtcraP0C6B2 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 AC153881.2-201ENSMUST00000214877 204 ntBASIC14.54□□□□□ -0.08
PtcraP0C6B2 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.54□□□□□ -0.08
PtcraP0C6B2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
PtcraP0C6B2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PtcraP0C6B2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PtcraP0C6B2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PtcraP0C6B2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PtcraP0C6B2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms